bioalpha.singlecell.get_gene_signatures_name_from_GSEA

bioalpha.singlecell.get_gene_signatures_name_from_GSEA(organism: Literal['Human', 'Mouse', 'Yeast', 'Fly', 'Fish', 'Worm'] = 'Human') → List[str]

Get gene signature name from GSEA (https://www.gsea-msigdb.org/).

Parameters:

organism (str, default = 'Human') – One from {'Human', 'Mouse', 'Yeast', 'Fly', 'Fish', 'Worm'}. This arugment has not effect if input is a .gmt file.

Return type:

List of gene_gignatures name.