H5AD Map
BioAlpha H5ADMap file is a framework that help running full single-cell analysis pipeline on Python for large biological datasets in realtime using as less as memory.
Import BioAlpha h5ad_map as:
from bioalpha import h5ad_map
Following the BioAlpha Mapping File Tutorial and AUCell Mapping File Tutorial to see how to use it.
An AnnData mapped to a HDF5 file with limited operations. |
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Analogous to |
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BatchReader |
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H5ADLoader |
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BioalphaBatchSettings |